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Species belonging to selected taxon:
Gasterosteus aculeatus
ABOUT THIS RECORD
ID:
MNEST007258
species:
Gasterosteus aculeatus
miRNA family:
miR-1279
source:
miRNEST
Taxonomy by NCBI:
Gasterosteus aculeatus
Gasterosteus
Gasterosteidae
Gasterosteiformes
Gasterosteiformes/Syngnathiformes group
Smegmamorpha
Percomorpha
Euacanthopterygii
Acanthopterygii
Holacanthopterygii
Euacanthomorpha
Acanthomorpha
Ctenosquamata
Eurypterygii
Neoteleostei
Neognathi
Euteleostei
Clupeocephala
Elopocephala
Teleostei
Neopterygii
Actinopteri
Actinopterygii
Euteleostomi
Teleostomi
Gnathostomata
Vertebrata
Craniata
Chordata
Deuterostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATATTGCTTCTTGGTGCAG
miRNA*
TCATTAAGGGGTTTTGTGACT
mismatches:
5
bulges:
0
View larger
pre-miRNA
AACTTATTTTT
TCATATTGCTTCTTGGTGCAG
TTAATTTTTTTATCTATACTTCAA
TCATTAAGGGGTTTTGTGACT
TGATTTAG
dot-bracket secondary structure
...........
(((((..(((((((((((...
........................
.)))))))))))..)))))..
........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record