ABOUT THIS RECORDspecies: Pimephales promelas
miRNA family: miR-92b
source: miRNEST
Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGGTTTGGACCGGTGCAGCTC miRNA* GTTTTCGATGCTCTTAACTTTC mismatches: 4 bulges: 1 |
pre-miRNA
ACGGTAGCTGGAGGTTTGGACCGGTGCAGCTCAGTAATGCTCTCGATCCAGTTGTCTATGGCTTTGGGGTTCTTCTCTGGGTTTTCGATGCTCTTAACTT
TCACTTCAGC
dot-bracket secondary structure
........((((((((.(((.((.((.(((((((....(((((.((.(((........))).)).)))))......)))))))..)).)).))).)))))
))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
ACGGTAGCTGGAGGTTTGGACCGGTGCAGCTCAGTAATGCTCTCGATCCAGTTGTCTATGGCTTTGGGGTTCTTCTCTGGGTTTTCGATGCTCTTAACTT
TCACTTCAGC
dot-bracket secondary structure
........((((((((.(((.((.((.(((((((....(((((.((.(((........))).)).)))))......)))))))..)).)).))).)))))
))).......
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|A7MBP4|IFT46_DANRE: 0.0000000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
