miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Danio rerio, Pimephales promelas, Cyprinus carpio, Misgurnus anguillicaudatus, Rutilus rutilus



ABOUT THIS RECORD

ID: MNEST007299
species: Pimephales promelas
miRNA family: miR-92b
source: miRNEST

Taxonomy by NCBI:
Pimephales promelas Pimephales Cyprinidae Cyprinoidea Cypriniformes Cypriniphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGTTTGGACCGGTGCAGCTC

miRNA*
GTTTTCGATGCTCTTAACTTTC

mismatches: 4
bulges: 1

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pre-miRNA
ACGGTAGCTGGAGGTTTGGACCGGTGCAGCTCAGTAATGCTCTCGATCCAGTTGTCTATGGCTTTGGGGTTCTTCTCTGGGTTTTCGATGCTCTTAACTT
TC
ACTTCAGC


dot-bracket secondary structure
........((((((((.(((.((.((.(((((((....(((((.((.(((........))).)).)))))......)))))))..)).)).))).)))))
))
).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt sp|A7MBP4|IFT46_DANRE: 0.0000000000003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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