miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Cucumis melo subsp. melo, Euonymus alatus, Euphorbia esula, Fagus sylvatica, Fragaria vesca, Fragaria x ananassa, Glycine soja, Glycyrrhiza uralensis, Hevea brasiliensis, Humulus lupulus, Jatropha curcas, Juglans hindsii x Juglans regia, Linum usitatissimum, Lotus japonicus, Manihot esculenta, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Prunus armeniaca, Prunus persica, Quercus petraea, Quercus robur, Trifolium pratense, Bruguiera gymnorhiza, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Populus trichocarpa, Phaseolus vulgaris, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST000733
species: Glycyrrhiza uralensis
miRNA family: MIRf879
source: miRNEST

Taxonomy by NCBI:
Glycyrrhiza uralensis Glycyrrhiza Galegeae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGTGGCAGTGGCAGTGGCAGT

miRNA*
 TCCCACTCCCACTCCCACTCC

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TAACGAACCCCAGTGGCAGTGGCAGTGGCAGTGGCAGCCGCATAAGAGAAGAGAAGAGAAGAAATGGTGGTTGGGCAAGCGGTGCTGCTTAGCGTTGGGG
TGAGAGTTGGAGTGACACCCACACACCTCGTGCCCTTCTGTTCTTTCCGCCGCCCCTCTTCTGCCTCCGCAAACCAGGAACAGGAAGACTCAACCACACC
CACAAGCAGTACCAAACCGAAACCACCATCATCGAGTTTCGGAAGACTAAAAGCCCAGCAAGTGAAGGCTCTCATACACAGAAACAAGCAGCACCAAAGG
CCCTCTCTCCAAGATGAAGATGATGCTGATGATAGACGTTTCAGGGGATGGGGTGATACGGATCCCACTCCCACTCCCACTCCCACTCCCAATCCCC

dot-bracket secondary structure
...........(((((.(((((.(((((.(((((...(((.((.((......((((.((.((..((((((((.((.....((((((((((.....(((((
((.(((((((((.((((....(((.....)))......))))..))))......(((.((((..............)))).)))..)))))...))).))
)).))))))))))...))..)))))))))).))...))))......))....((...))..(((...(((................)))..))).....(
((((.(((((....(((((......(((....)))...)))))))))).))))).)).)))...))))).))))).))))).)))))..........


SIMILARITIES
miRBase dan-mir-289: 0.00000009

PMRD osa-miRf11026-akr: 0.000005

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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