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Species belonging to selected taxon:

Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum



ABOUT THIS RECORD

ID: MNEST007361
species: Solanum tuberosum
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCTC

miRNA*
 GGGATGTTGTTTGGCTCGACA

mismatches: 3
bulges: 0
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pre-miRNA
 TTGTGTGTGGTGAGTTTGAGGGGGATGTTGTTTGGCTCGACACAATTACTCTCTTGTATGTGTTTATTTATTCGTCATCAAGATTGATGTTGATAACGAA
TAAATTAAACACAACAAGATATGTAAAAAGGGAGTAAAGGCGTCGGACCAGGCTTCATTCCTCTCAAACAATATTCTACTT

dot-bracket secondary structure
....(((.((((.((((((((((((((..((((((.(((((....((((((((((...(((((((((((((((((.(((((........))))).)))))
)))).))))))))(((.....)))...))))))))))....))))).))))))..))))))))))))))..)))).)))..


SIMILARITIES
miRBase zma-MIR166m: 0.000000009

PMRD zma-miR166m: 0.000000009

microPC miR166: 0.0001		UniProt no hits

RFAM mir-166: 0.0000002		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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