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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST007391
species: Solanum tuberosum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTACTCCCTCCGTCCCATTTT

miRNA*
 AATGGGACGGAGGGAGTACTT

mismatches: 1
bulges: 0
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pre-miRNA
 TTATGTATATTCTACTCCCTCCGTCCCATTTTATGTGGCACCATTTCCTTTTTGGTCAGTCCCAAAAAGAATGTCACATTTTCTTATATGGTAAGTATTT
AAAGGTACAATTCCTCTTTTACCCTTGTTGGTTCCACTTAATCTTAAAGAAAGTATTCCAATACATTTATGAGGAGAGAGAAAAATGAGTCTACTTTTTA
ATATGACTATTTTTTGAAGGGACAATTTGGTAAACATTTCAAAGTCTTCATTTATTTCTTAAACTCCGTGCCCGGTCAAATGTTGCCACATAAAATGGGA
CGGAGGGAGTACTTAATTTGTT

dot-bracket secondary structure
............((((((((((((((((((((((((((((.(((((.((((((((......))))))))..((((....((((....(((((..(((((.
(((((((..((((.((((((.((..((((((....((((..(((...)))))))...))))))((....)).)).)))))).....)))).))))))).)
)))).))))).....)))).))))(((.((((....................................)))).))).))))).)))))))))))))))))
)))))))))))...........


SIMILARITIES
miRBase osa-MIR812h: 0.00007

PMRD osa-miR812h: 0.00007

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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