ABOUT THIS RECORDspecies: Schistosoma mansoni
miRNA family: miR-3533
source: miRNEST
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGTGATGTGGATAT miRNA* ATTCATGACACTACATAC mismatches: 2 bulges: 2 |
pre-miRNA
GGAAGCATCGGGAATTCATGACACTACATACAATTCGATTATGAAGTGTGATGTGGATATCCGTAAAGAT
dot-bracket secondary structure
........((((.((((((((((((.((((.........)))).)))))..))))))).)))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GGAAGCATCGGGAATTCATGACACTACATACAATTCGATTATGAAGTGTGATGTGGATATCCGTAAAGAT
dot-bracket secondary structure
........((((.((((((((((((.((((.........)))).)))))..))))))).)))).......
SIMILARITIES| miRBase gga-mir-3533: 0.00000005 PMRD no hits microPC no hits | UniProt sp|P02581|ACT1_SOYBN: 0.000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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