miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Schistosoma mansoni, Schistosoma japonicum



ABOUT THIS RECORD

ID: MNEST007482
species: Schistosoma mansoni
miRNA family: miR-3533
source: miRNEST

Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
ATGAAGTGTGATGTGGATAT

miRNA*
ATTCATGACACTACATAC

mismatches: 2
bulges: 2

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pre-miRNA
GGAAGCATCGGGAATTCATGACACTACATACAATTCGATTATGAAGTGTGATGTGGATATCCGTAAAGAT

dot-bracket secondary structure
........((((.((((((((((((.((((.........)))).)))))..))))))).)))).......


SIMILARITIES
miRBase gga-mir-3533: 0.00000005

PMRD no hits

microPC no hits
UniProt sp|P02581|ACT1_SOYBN: 0.000003

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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