ABOUT THIS RECORDspecies: Schistosoma mansoni
miRNA family: miR-3503
source: miRNEST
Taxonomy by NCBI:
Schistosoma mansoni Schistosoma Schistosomatidae Schistosomatoidea Strigeidida Digenea Trematoda Platyhelminthes Acoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGTGGAATCCAGGACGCGCGT miRNA* GCGTATCCTGGATTCCACTGT mismatches: 1 bulges: 0 |
pre-miRNA
ATCCAGCCAACGACTCCCAAATAGGATGAAACGCGTATCCTGGATTCCACTGTTAGCCACTATCTATCTTTGCTTACAGTGGAATCCAGGACGCGCGTTT
CGTCCTATTTGGGACTCGTGAATTAAG
dot-bracket secondary structure
.........((((.((((((((((((((((((((((.((((((((((((((((.(((..............))).)))))))))))))))).))))))))
)))))))))))))).))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATCCAGCCAACGACTCCCAAATAGGATGAAACGCGTATCCTGGATTCCACTGTTAGCCACTATCTATCTTTGCTTACAGTGGAATCCAGGACGCGCGTTT
CGTCCTATTTGGGACTCGTGAATTAAG
dot-bracket secondary structure
.........((((.((((((((((((((((((((((.((((((((((((((((.(((..............))).)))))))))))))))).))))))))
)))))))))))))).))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM Hammerhead_1: 0.0000000000001 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
