miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007568
species: Macaca fascicularis
miRNA family: miR-1285
source: miRNEST

Taxonomy by NCBI:
Macaca fascicularis Macaca Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTGGGCAACATAGCCAGACTT

miRNA*
 GAATGGCGTGAACCCGGGA

mismatches: 4
bulges: 2
View larger
pre-miRNA
 TACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCTGAGATCCGGCCACTGCACTCCAGCCTGGGCAACATAGCC
AGACTTCGTCTCAAAAATAAAAAAA

dot-bracket secondary structure
............((((((.((((..(((((((..((((((....((((..(((((((.((((.....)))))))))))))))..))))))...))).)))
)..))))))))))............


SIMILARITIES
miRBase ppy-mir-1273: 1e-19

PMRD ptc-miRf12524-akr: 0.0000000000001

microPC no hits		UniProt sp|Q86U02|CN165_HUMAN: 0.000000002

RFAM Metazoa_SRP: 4e-41		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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