ABOUT THIS RECORDspecies: Anolis carolinensis
miRNA family: mir-1285
source: miRNEST
Taxonomy by NCBI:
Anolis carolinensis Anolis Polychrotinae Iguanidae Iguania Squamata Lepidosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCTGGGCAAGAAAGTGAGAGT miRNA* AAAGCTCATAGCTGCCCAGACT mismatches: 4 bulges: 2 |
pre-miRNA
TGCAATGATCGTCTGGGCAAGAAAGTGAGAGTCAAGTACAACTCTGATGACACCATTCGGGACCTGAAAAAGCTCATAGCTGCCCAGACTGGAACTCG
dot-bracket secondary structure
..........(((((((((.(...(((((..(((.((....(((.((((....)))).))))).))).....)))))..)))))))))).........
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGCAATGATCGTCTGGGCAAGAAAGTGAGAGTCAAGTACAACTCTGATGACACCATTCGGGACCTGAAAAAGCTCATAGCTGCCCAGACTGGAACTCG
dot-bracket secondary structure
..........(((((((((.(...(((((..(((.((....(((.((((....)))).))))).))).....)))))..)))))))))).........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q791B0|UBL5_PSAOB: 0.000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
