ABOUT THIS RECORDspecies: Papio anubis
miRNA family: mir-1273
source: miRNEST
Taxonomy by NCBI:
Papio anubis Papio Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGTGACAGAGCAAGACTCTG miRNA* GATTATGCCACTGTCCTCCGG mismatches: 4 bulges: 2 |
pre-miRNA
AGTGAGCCAAGATTATGCCACTGTCCTCCGGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAA
dot-bracket secondary structure
..((((...(((((.(((..(((((.(((.....))).))))).))).)).)))..))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AGTGAGCCAAGATTATGCCACTGTCCTCCGGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAA
dot-bracket secondary structure
..((((...(((((.(((..(((((.(((.....))).))))).))).)).)))..))))....
SIMILARITIES| miRBase ppy-mir-1273: 0.0000000000008 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 9e-16 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
