miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Rattus norvegicus, Macaca fascicularis, Papio anubis, Homo sapiens, Peromyscus maniculatus bairdii, Pongo abelii, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Peromyscus polionotus subgriseus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST007726
species: Papio anubis
miRNA family: mir-1273
source: miRNEST

Taxonomy by NCBI:
Papio anubis Papio Cercopithecinae Cercopithecidae Cercopithecoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGTGACAGAGCAAGACTCTG

miRNA*
GATTATGCCACTGTCCTCCGG

mismatches: 4
bulges: 2

View larger
pre-miRNA
AGTGAGCCAAGATTATGCCACTGTCCTCCGGCCTGGGTGACAGAGCAAGACTCTGTCTCAAAAA

dot-bracket secondary structure
..((((...(((((.(((..(((((.(((.....))).))))).))).)).)))..))))....


SIMILARITIES
miRBase ppy-mir-1273: 0.0000000000008

PMRD no hits

microPC no hits
UniProt no hits

RFAM Metazoa_SRP: 9e-16
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;