miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000821
species: Gossypium raimondii
miRNA family: MIR418
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GAAAGTGATGATGAAATGAAT

miRNA*
 TTTTCATAGTTATTATATA

mismatches: 4
bulges: 2
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pre-miRNA
 GAATTGTTACATTTTTCATAGTTATTATATATGCCAACTTGAAGAGGCAAAATTTGAAAGTGATGATGAAATGAATGTCTTATGA

dot-bracket secondary structure
........(((((((((((.((((((.....((((..........)))).........)))))).)))))..)))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record




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