miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Gossypium arboreum, Gossypium hirsutum, Gossypium raimondii, Theobroma cacao



ABOUT THIS RECORD

ID: MNEST000821
species: Gossypium raimondii
miRNA family: MIR418
source: miRNEST

Taxonomy by NCBI:
Gossypium raimondii Gossypium Malvoideae Malvaceae Malvales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GAAAGTGATGATGAAATGAAT

miRNA*
TTTTCATAGTTATTATATA

mismatches: 4
bulges: 2

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pre-miRNA
GAATTGTTACATTTTTCATAGTTATTATATATGCCAACTTGAAGAGGCAAAATTTGAAAGTGATGATGAAATGAATGTCTTATGA

dot-bracket secondary structure
........(((((((((((.((((((.....((((..........)))).........)))))).)))))..)))))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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