miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis, Glycine soja, Glycyrrhiza uralensis, Lotus japonicus, Medicago sativa, Phaseolus acutifolius, Phaseolus coccineus, Pisum sativum, Trifolium pratense, Cajanus cajan, Cicer arietinum, Glycine max, Vigna unguiculata, Medicago truncatula, Phaseolus vulgaris



ABOUT THIS RECORD

ID: MNEST008359
species: Medicago truncatula
miRNA family: MIR1514
source: miRNEST

Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCATTTCTAAAATAGGCATT

miRNA*
CGCCTATTTTAGAATGAAAA

mismatches: 1
bulges: 1

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pre-miRNA
ACACTGCTCTTTTCATTTCTAAAATAGGCATTGCCATTCAAATTCCATTGATTCATTCAGCAACGCCTATTTTAGAATGAAAACAACATTT

dot-bracket secondary structure
.........((((((((.(((((((((((.((((...((((......))))........)))).)))))))))))))))))))........


SIMILARITIES
miRBase gma-MIR1514a: 0.00007

PMRD gma-miR1514a: 0.00007

microPC miR1514: 4e-34
UniProt no hits

RFAM no hits
most similar mature miRNAs

Identical with: miR1514 from microPC (MNEST046132)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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