ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR1514
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTCATTTCTAAAATAGGCATT miRNA* CGCCTATTTTAGAATGAAAA mismatches: 1 bulges: 1 |
pre-miRNA
ACACTGCTCTTTTCATTTCTAAAATAGGCATTGCCATTCAAATTCCATTGATTCATTCAGCAACGCCTATTTTAGAATGAAAACAACATTT
dot-bracket secondary structure
.........((((((((.(((((((((((.((((...((((......))))........)))).)))))))))))))))))))........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACTGCTCTTTTCATTTCTAAAATAGGCATTGCCATTCAAATTCCATTGATTCATTCAGCAACGCCTATTTTAGAATGAAAACAACATTT
dot-bracket secondary structure
.........((((((((.(((((((((((.((((...((((......))))........)))).)))))))))))))))))))........
SIMILARITIES| miRBase gma-MIR1514a: 0.00007 PMRD gma-miR1514a: 0.00007 microPC miR1514: 4e-34 | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: miR1514 from microPC (MNEST046132) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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