ABOUT THIS RECORDspecies: Medicago truncatula
miRNA family: MIR2604
source: miRNEST
Taxonomy by NCBI:
Medicago truncatula Medicago Trifolieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TAATTTTTATGTGGGAGTGTT miRNA* TACTCCTTCTAAAAAATAAGT mismatches: 5 bulges: 0 |
pre-miRNA
AACACATCCACTAATTTTTATGTGGGAGTGTTTTAGCAAAGCTATAACTTAGAGTGTATTTAACCACTGTTTAGTTATTTATTTGCTAAAATACTCCTTC
TAAAAAATAAGTGG
dot-bracket secondary structure
.......(((((.((((((....(((((((((((((((((...((((((.((((((........)))).)).))))))...)))))))))))))))))..
..)))))).)))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AACACATCCACTAATTTTTATGTGGGAGTGTTTTAGCAAAGCTATAACTTAGAGTGTATTTAACCACTGTTTAGTTATTTATTTGCTAAAATACTCCTTC
TAAAAAATAAGTGG
dot-bracket secondary structure
.......(((((.((((((....(((((((((((((((((...((((((.((((((........)))).)).))))))...)))))))))))))))))..
..)))))).)))))
SIMILARITIES| miRBase mtr-MIR2604: 3e-60 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: mtr-MIR2604 from miRBase (MNEST040836) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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