miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Aedes aegypti, Culex quinquefasciatus, Anopheles gambiae, Anopheles stephensi, Polypedilum vanderplanki



ABOUT THIS RECORD

ID: MNEST008503
species: Culex quinquefasciatus
miRNA family: miR-669n
source: miRNEST

Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTTTGTGTGTGGATGTGCGTG

miRNA*
 CTAACGTCCGCGCCTGGGTTC

mismatches: 5
bulges: 0
View larger
pre-miRNA
 ACACATGGAGTAAAAGAGAGATTTTGTGTGTGGATGTGCGTGGTTGTGCACGAGAAATAAGCACTACTTTGAATAAAAGGAAGTCTGCGCACTGTCACGA
CACTGCTGCTAACGTCCGCGCCTGGGTTCTACTACTCTAATTGATTG

dot-bracket secondary structure
.....(((((((....((((...(((.((((((((((..(((((.(((..((.((.....(((..(((((.........))))).)))......)).)).
))).)))))..)))))))))).))).))))..)))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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