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Species belonging to selected taxon:
Bicyclus anynana
,
Drosophila melanogaster
,
Bombyx mori
,
Aedes aegypti
,
Ixodes scapularis
,
Litopenaeus vannamei
,
Lepeophtheirus salmonis
,
Acyrthosiphon pisum
,
Culex quinquefasciatus
,
Anopheles gambiae
,
Dendroctonus ponderosae
,
Daphnia pulex
,
Nasonia vitripennis
,
Drosophila simulans
,
Petrolisthes cinctipes
,
Aphis gossypii
,
Tetranychus urticae
,
Glossina morsitans morsitans
,
Choristoneura fumiferana
,
Spodoptera frugiperda
,
Heliothis virescens
,
Rhipicephalus microplus
,
Locusta migratoria
,
Phlebotomus papatasi
,
Penaeus monodon
,
Drosophila sechellia
,
Drosophila auraria
,
Artemia franciscana
,
Nilaparvata lugens
,
Antheraea assama
,
Drosophila pseudoobscura
,
Teleopsis dalmanni
,
Lutzomyia longipalpis
,
Caligus rogercresseyi
,
Nasonia giraulti
,
Homarus americanus
,
Bombus terrestris
,
Myzus persicae
,
Drosophila willistoni
,
Drosophila ananassae
,
Solenopsis invicta
,
Drosophila virilis
,
Drosophila erecta
,
Drosophila grimshawi
,
Ceratitis capitata
,
Spodoptera littoralis
,
Peregrinus maidis
,
Samia cynthia ricini
,
Drosophila mojavensis
,
Danaus plexippus
,
Rhipicephalus appendiculatus
,
Cochliomyia hominivorax
,
Anopheles stephensi
,
Diabrotica virgifera virgifera
,
Haematobia irritans irritans
,
Eriocheir sinensis
,
Papilio xuthus
,
Onychiurus arcticus
,
Rhodnius prolixus
,
Carcinus maenas
,
Polypedilum vanderplanki
,
Ostrinia nubilalis
,
Lernaeocera branchialis
,
Caligus clemensi
,
Laupala kohalensis
,
Frankliniella occidentalis
,
Daphnia magna
,
Gammarus pulex
,
Trichoplusia ni
,
Calanus finmarchicus
,
Gryllus bimaculatus
,
Drosophila yakuba
,
Epiphyas postvittana
,
Callinectes sapidus
,
Fenneropenaeus chinensis
,
Apis mellifera
,
Tribolium castaneum
ABOUT THIS RECORD
ID:
MNEST008503
species:
Culex quinquefasciatus
miRNA family:
miR-669n
source:
miRNEST
Taxonomy by NCBI:
Culex quinquefasciatus
Culex pipiens complex
Culex
Culex
Culicini
Culicinae
Culicidae
Culicoidea
Culicimorpha
Nematocera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGTGTGTGGATGTGCGTG
miRNA*
CTAACGTCCGCGCCTGGGTTC
mismatches:
5
bulges:
0
View larger
pre-miRNA
ACACATGGAGTAAAAGAGAGA
TTTTGTGTGTGGATGTGCGTG
GTTGTGCACGAGAAATAAGCACTACTTTGAATAAAAGGAAGTCTGCGCACTGTCACGA
CACTGCTG
CTAACGTCCGCGCCTGGGTTC
TACTACTCTAATTGATTG
dot-bracket secondary structure
.....(((((((....((((.
..(((.((((((((((..(((
((.(((..((.((.....(((..(((((.........))))).)))......)).)).
))).))))
)..)))))))))).))).)))
)..)))))))........
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record