ABOUT THIS RECORDspecies: Culex quinquefasciatus
miRNA family: miR-669n
source: miRNEST
Taxonomy by NCBI:
Culex quinquefasciatus Culex pipiens complex Culex Culex Culicini Culicinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTTGTGTGTGGATGTGCGTG miRNA* CTAACGTCCGCGCCTGGGTTC mismatches: 5 bulges: 0 |
pre-miRNA
ACACATGGAGTAAAAGAGAGATTTTGTGTGTGGATGTGCGTGGTTGTGCACGAGAAATAAGCACTACTTTGAATAAAAGGAAGTCTGCGCACTGTCACGA
CACTGCTGCTAACGTCCGCGCCTGGGTTCTACTACTCTAATTGATTG
dot-bracket secondary structure
.....(((((((....((((...(((.((((((((((..(((((.(((..((.((.....(((..(((((.........))))).)))......)).)).
))).)))))..)))))))))).))).))))..)))))))........
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ACACATGGAGTAAAAGAGAGATTTTGTGTGTGGATGTGCGTGGTTGTGCACGAGAAATAAGCACTACTTTGAATAAAAGGAAGTCTGCGCACTGTCACGA
CACTGCTGCTAACGTCCGCGCCTGGGTTCTACTACTCTAATTGATTG
dot-bracket secondary structure
.....(((((((....((((...(((.((((((((((..(((((.(((..((.((.....(((..(((((.........))))).)))......)).)).
))).)))))..)))))))))).))).))))..)))))))........
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
