miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Alvinella pompejana
,
Helobdella robusta
,
Lumbricus rubellus
,
Tubifex tubifex
ABOUT THIS RECORD
ID:
MNEST008764
species:
Helobdella robusta
miRNA family:
miR-466h
source:
miRNEST
Taxonomy by NCBI:
Helobdella robusta
Helobdella
Glossiphoniidae
Rhynchobdellida
Hirudinea
Hirudinida
Clitellata
Annelida
Annelida/Echiura/Pogonophora group
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AACGCGCGCACACACACACGC
miRNA*
GTGTGTGTGTGCGTGCGTCTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGCGTGCGTCTT
GGTTCCATCCTGTTTCGTGGTTTATGTTTGTACTGTTCCCCGTCATATCCTCTCGTT
GATTGGTTTTATTTTAATATATCGCTTTCAACAGCGCAGTGCAAACAA
AACGCGCGCACACACACACGC
ATGCACACTAACATGTACA
dot-bracket secondary structure
.(((((((((..((((((((((
((((((((((((((((((..(
((..((((........)))).)))((((((((((((..................(((
((.((((..(((....))).))))...)))))...)))))))))))).
.))))))))))))))))))))
))))))))..)))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
7SK: 0.0007
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record