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Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000879
species: Helianthus petiolaris
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Helianthus petiolaris Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 AATGTTGTCTGGCTCGAGA

mismatches: 3
bulges: 0
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pre-miRNA
 TTTCTTTTGTGGGGAATGTTGTCTGGCTCGAGACCACAAGAAAGCTTCAATCTTTATAATCTTTATGTTACATAATCACATAATTGATCAATCTTTGTTGA
TCAATGATTAAAGATTAGAATCTTGTGTTGTCGGACCAGGCTTCATTCCCCTCATGTGT

dot-bracket secondary structure
)......((.((((((((..((((((.((((...(((((((....(((((((((((..(((.((((((.........))))))(((((((((....)))))
)))).))))))))))).))))))))))...)))).))))))..)))))))).)).....


SIMILARITIES
miRBase ctr-MIR166: 8.0E-9

PMRD aqc-miR166e: 8.0E-9

microPC miR166: 8.0E-77		UniProt no hits

RFAM 6mir-166: 6.0E-7		most similar mature miRNAs

Identical with: miR166 from microPC (MNEST044803)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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