ABOUT THIS RECORDspecies: Taeniopygia guttata
miRNA family: miR-3195
source: miRNEST
Taxonomy by NCBI:
Taeniopygia guttata Taeniopygia Estrildinae Estrildidae Passeroidea Passeriformes Neognathae Aves Coelurosauria Theropoda Saurischia Dinosauria Archosauria Sauria Sauropsida Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CGCGCCGGGCCCGGGGCTTCT miRNA* AAGCCCCCCTCCCCGGCGGCGCT mismatches: 3 bulges: 2 |
pre-miRNA
TGTGGCGTACAGAAGCCCCCCTCCCCGGCGGCGCTCTCGGGGGACCCAAGTCCTTGTGATCGAGGCCGCAGCCCGCGGACGGTGTGAGGCCGGTAGCGGC
CCCCCGGCGCGCCGGGCCCGGGGCTTCTCGGAGTCGG
dot-bracket secondary structure
..((((....(((((((((....(((((((.((((...(((((.((...(((((((....)))))((((.....)))).((((.....))))...)))))
)))).)))))))))))...)))))))))....)))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TGTGGCGTACAGAAGCCCCCCTCCCCGGCGGCGCTCTCGGGGGACCCAAGTCCTTGTGATCGAGGCCGCAGCCCGCGGACGGTGTGAGGCCGGTAGCGGC
CCCCCGGCGCGCCGGGCCCGGGGCTTCTCGGAGTCGG
dot-bracket secondary structure
..((((....(((((((((....(((((((.((((...(((((.((...(((((((....)))))((((.....)))).((((.....))))...)))))
)))).)))))))))))...)))))))))....)))).
SIMILARITIES| miRBase mmu-mir-5105: 0.000000000000002 PMRD no hits microPC no hits | UniProt no hits RFAM SSU_rRNA_eukarya: 3e-39 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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