ABOUT THIS RECORDspecies: Aphis gossypii
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Aphis gossypii Aphis Aphis Aphidini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTGCTGCTGCTGCTGCTGCA miRNA* CTGGTTGTGGCCGCAACAACAG mismatches: 4 bulges: 1 |
pre-miRNA
TCGAGGCCGCTGTTGCTGCTGCTGCTGCTGCACCGCCTCATGTCGTAGTGATGGCCGTTGTCCTGTGTCGAGTGTCTGCNCATGGCCATGGGCTGTTGCT
GCTGCTGCGGCGGCGGCTGGTTGTGGCCGCAACAACAGCACATCCC
dot-bracket secondary structure
........(((((((.(((.(((((.(((((.(((((.((.((.((((((((((((..((.((((.((.((...)).)).)).)).))..))))))))))
)).)))).)))))..)).))).))))).))).))))))).......
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
TCGAGGCCGCTGTTGCTGCTGCTGCTGCTGCACCGCCTCATGTCGTAGTGATGGCCGTTGTCCTGTGTCGAGTGTCTGCNCATGGCCATGGGCTGTTGCT
GCTGCTGCGGCGGCGGCTGGTTGTGGCCGCAACAACAGCACATCCC
dot-bracket secondary structure
........(((((((.(((.(((((.(((((.(((((.((.((.((((((((((((..((.((((.((.((...)).)).)).)).))..))))))))))
)).)))).)))))..)).))).))))).))).))))))).......
SIMILARITIES| miRBase no hits PMRD ath-miRf10746-akr: 0.000007 microPC no hits | UniProt no hits RFAM mir-598: 0.0005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
download this record
