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Species belonging to selected taxon:

Aphis gossypii, Aphis gossypii



ABOUT THIS RECORD

ID: MNEST008886
species: Aphis gossypii
miRNA family: mir-1322
source: miRNEST

Taxonomy by NCBI:
Aphis gossypii Aphis Aphis Aphidini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGCTGCTGCTGCTGCTGCA

miRNA*
CTGGTTGTGGCCGCAACAACAG

mismatches: 4
bulges: 1

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pre-miRNA
TCGAGGCCGCTGTTGCTGCTGCTGCTGCTGCACCGCCTCATGTCGTAGTGATGGCCGTTGTCCTGTGTCGAGTGTCTGCNCATGGCCATGGGCTGTTGCT
GCTGCTGCGGCGGCGGCTGGTTGTGGCCGCAACAACAGCACATCCC


dot-bracket secondary structure
........(((((((.(((.(((((.(((((.(((((.((.((.((((((((((((..((.((((.((.((...)).)).)).)).))..))))))))))
)).)))).)))))..)).))).))))).))).))))))).......



SIMILARITIES
miRBase no hits

PMRD ath-miRf10746-akr: 0.000007

microPC no hits
UniProt no hits

RFAM mir-598: 0.0005
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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