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Species belonging to selected taxon:

Antirrhinum majus, Coffea canephora, Fraxinus excelsior, Ipomoea batatas, Mimulus guttatus, Mimulus guttatus var. nasutus, Mimulus lewisii, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Ocimum basilicum, Petunia axillaris subsp. axillaris, Salvia miltiorrhiza, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Striga hermonthica, Triphysaria pusilla, Triphysaria versicolor, Capsicum annuum, Catharanthus roseus, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008945
species: Ipomoea nil
miRNA family: miR166m
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GGGATGTTGGCTGGCTCGATG

miRNA*
 TCGGACCAGGCTTCATTCCTC

mismatches: 2
bulges: 2
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pre-miRNA
 ACGACGAGGAGGAGATATGAGGAGTTTGAGGGGGATGTTGGCTGGCTCGATGCACTTACTTATCATCTTCCTCAAAAACATGCGACATATACATACATAT
GGAAGATCATATATCTATAAATATATATTTGTCTTCCATATCCCATATATATATGTTGATGATGGTGGAGTGATGGCATCGGACCAGGCTTCATTCCTCC
CAAAACACCCATATTTCTATCTGCTCT

dot-bracket secondary structure
......(((.(((((((((.((.((((..((((((((..((((((.(((((((..((((((((((((...............(((((((((.(((.((((
((((((.((.((((.((....)).)))).))))))))))))....))).)))))))))..)))))).))))))..))))))).))).))).)))))))).
..)))).))))))))))).))).....


SIMILARITIES
miRBase mtr-MIR166c: 0.000003

PMRD ini-miR166: 9e-25

microPC miR166: 0.000000003		UniProt no hits

RFAM mir-166: 0.00001		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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