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Species belonging to selected taxon:

Ipomoea batatas, Nicotiana benthamiana, Nicotiana langsdorffii x Nicotiana sanderae, Nicotiana tabacum, Petunia axillaris subsp. axillaris, Solanum habrochaites, Solanum lycopersicum, Solanum melongena, Solanum pennellii, Solanum torvum, Capsicum annuum, Solanum tuberosum, Ipomoea nil



ABOUT THIS RECORD

ID: MNEST008945
species: Ipomoea nil
miRNA family: miR166m
source: miRNEST

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGATGTTGGCTGGCTCGATG

miRNA*
TCGGACCAGGCTTCATTCCTC

mismatches: 2
bulges: 2

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pre-miRNA
ACGACGAGGAGGAGATATGAGGAGTTTGAGGGGGATGTTGGCTGGCTCGATGCACTTACTTATCATCTTCCTCAAAAACATGCGACATATACATACATAT
GGAAGATCATATATCTATAAATATATATTTGTCTTCCATATCCCATATATATATGTTGATGATGGTGGAGTGATGGCATCGGACCAGGCTTCATTCCTCC
CAAAACACCCATATTTCTATCTGCTCT


dot-bracket secondary structure
......(((.(((((((((.((.((((..((((((((..((((((.(((((((..((((((((((((...............(((((((((.(((.((((
((((((.((.((((.((....)).)))).))))))))))))....))).)))))))))..)))))).))))))..))))))).))).))).)))))))).
..)))).))))))))))).))).....



SIMILARITIES
miRBase mtr-MIR166c: 0.000003

PMRD ini-miR166: 9e-25

microPC miR166: 0.000000003
UniProt no hits

RFAM mir-166: 0.00001
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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