ABOUT THIS RECORDspecies: Ancylostoma caninum
miRNA family: miR-2340
source: miRNEST
Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGACTTCCCTGGTGGTCGAGT miRNA* TGTACTACCAGGGAAGTCCTA mismatches: 2 bulges: 0 |
pre-miRNA
TGCCCTGCATTGGCAGGTGGATTCTTACCCACTGTACTACCAGGGAAGTCCTATATGTCACCCTTTAAAAAAAACTTCTTACTTTGAGGACTTCCCTGGT
GGTCGAGTGGTTAAGAATCTGCCTTGCACGGGTTCAG
dot-bracket secondary structure
.((((((((.....(((((((((((((.(((((..(((((((((((((((((..................................))))))))))))))
)))..))))).))))))))))))))))).))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGCCCTGCATTGGCAGGTGGATTCTTACCCACTGTACTACCAGGGAAGTCCTATATGTCACCCTTTAAAAAAAACTTCTTACTTTGAGGACTTCCCTGGT
GGTCGAGTGGTTAAGAATCTGCCTTGCACGGGTTCAG
dot-bracket secondary structure
.((((((((.....(((((((((((((.(((((..(((((((((((((((((..................................))))))))))))))
)))..))))).))))))))))))))))).))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM tRNA: 0.0000000005 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
