miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Caenorhabditis elegans, Ancylostoma caninum, Heterorhabditis bacteriophora, Caenorhabditis japonica, Caenorhabditis brenneri, Strongyloides ratti, Caenorhabditis remanei, Nippostrongylus brasiliensis, Strongyloides stercoralis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST008958
species: Ancylostoma caninum
miRNA family: miR-2340
source: miRNEST

Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGACTTCCCTGGTGGTCGAGT

miRNA*
TGTACTACCAGGGAAGTCCTA

mismatches: 2
bulges: 0

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pre-miRNA
TGCCCTGCATTGGCAGGTGGATTCTTACCCACTGTACTACCAGGGAAGTCCTATATGTCACCCTTTAAAAAAAACTTCTTACTTTGAGGACTTCCCTGGT
GGTCGAGT
GGTTAAGAATCTGCCTTGCACGGGTTCAG


dot-bracket secondary structure
.((((((((.....(((((((((((((.(((((..(((((((((((((((((..................................))))))))))))))
)))..)))
)).))))))))))))))))).))))....



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM tRNA: 0.0000000005
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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