ABOUT THIS RECORDspecies: Ancylostoma caninum
miRNA family: miR-100c
source: miRNEST
Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACCCGTAGAATTGAAATCGT miRNA* GATTCTATTCTCGGGTAGA mismatches: 2 bulges: 2 |
pre-miRNA
TAACTACTGTCGCTTTCGATCAACCCGTAGAATTGAAATCGTGTTAGATTTTGGTAACACGATTCTATTCTCGGGTAGATTGCTTGCGTTCAGCTGT
dot-bracket secondary structure
..((..(((.(((...(((((.(((((.(((((.(((.((((((((........))))))))))).)))))))))).)))))...)))..)))..))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TAACTACTGTCGCTTTCGATCAACCCGTAGAATTGAAATCGTGTTAGATTTTGGTAACACGATTCTATTCTCGGGTAGATTGCTTGCGTTCAGCTGT
dot-bracket secondary structure
..((..(((.(((...(((((.(((((.(((((.(((.((((((((........))))))))))).)))))))))).)))))...)))..)))..))
SIMILARITIES| miRBase bma-mir-100c: 4e-22 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
