miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Ancylostoma caninum, Nippostrongylus brasiliensis, Ancylostoma ceylanicum



ABOUT THIS RECORD

ID: MNEST008961
species: Ancylostoma caninum
miRNA family: miR-100c
source: miRNEST

Taxonomy by NCBI:
Ancylostoma caninum Ancylostoma Ancylostomatinae Ancylostomatidae Ancylostomatoidea Strongylida Rhabditida Chromadorea Nematoda Pseudocoelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AACCCGTAGAATTGAAATCGT

miRNA*
GATTCTATTCTCGGGTAGA

mismatches: 2
bulges: 2

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pre-miRNA
TAACTACTGTCGCTTTCGATCAACCCGTAGAATTGAAATCGTGTTAGATTTTGGTAACACGATTCTATTCTCGGGTAGATTGCTTGCGTTCAGCTGT

dot-bracket secondary structure
..((..(((.(((...(((((.(((((.(((((.(((.((((((((........))))))))))).)))))))))).)))))...)))..)))..))


SIMILARITIES
miRBase bma-mir-100c: 4e-22

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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