ABOUT THIS RECORDspecies: Peromyscus maniculatus bairdii
miRNA family: mir-3470
source: miRNEST
Taxonomy by NCBI:
Peromyscus maniculatus bairdii Peromyscus maniculatus Peromyscus Neotominae Cricetidae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCACTTTGTAGTCCAGGCTGG miRNA* TGCCTGGCCCTGGAGTGTTC mismatches: 4 bulges: 1 |
pre-miRNA
TGTCCCGGAATTCACTTTGTAGTCCAGGCTGGCCTCAAATTCACAGAGATCTGCCTGGCCCTGGAGTGTTCTTAAAGGC
dot-bracket secondary structure
......((((..(((((((..(.((((((.((.(((.........))).)).)))))))..))))))))))).......
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TGTCCCGGAATTCACTTTGTAGTCCAGGCTGGCCTCAAATTCACAGAGATCTGCCTGGCCCTGGAGTGTTCTTAAAGGC
dot-bracket secondary structure
......((((..(((((((..(.((((((.((.(((.........))).)).)))))))..))))))))))).......
SIMILARITIES| miRBase mmu-mir-3470a: 0.000000000001 PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
