miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mus musculus, Sus scrofa, Bos taurus, Rattus norvegicus, Gallus gallus, Canis lupus familiaris, Ovis aries, Macaca fascicularis, Anolis carolinensis, Trichosurus vulpecula, Papio anubis, Homo sapiens, Taeniopygia guttata, Peromyscus maniculatus bairdii, Pongo abelii, Ursus americanus, Equus caballus, Oryctolagus cuniculus, Macaca nemestrina, Cavia porcellus, Bos indicus, Meleagris gallopavo, Lonchura striata domestica, Bos sp., Macropus eugenii, Peromyscus polionotus subgriseus, Capra hircus, Pan troglodytes verus, Macaca mulatta



ABOUT THIS RECORD

ID: MNEST008988
species: Peromyscus maniculatus bairdii
miRNA family: mir-3470
source: miRNEST

Taxonomy by NCBI:
Peromyscus maniculatus bairdii Peromyscus maniculatus Peromyscus Neotominae Cricetidae Muroidea Sciurognathi Rodentia Glires Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCACTTTGTAGTCCAGGCTGG

miRNA*
TGCCTGGCCCTGGAGTGTTC

mismatches: 4
bulges: 1

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pre-miRNA
TGTCCCGGAATTCACTTTGTAGTCCAGGCTGGCCTCAAATTCACAGAGATCTGCCTGGCCCTGGAGTGTTCTTAAAGGC

dot-bracket secondary structure
......((((..(((((((..(.((((((.((.(((.........))).)).)))))))..))))))))))).......


SIMILARITIES
miRBase mmu-mir-3470a: 0.000000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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