miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Bicyclus anynana, Bombyx mori, Spodoptera frugiperda, Heliothis virescens, Antheraea assama, Spodoptera littoralis, Samia cynthia ricini, Danaus plexippus, Papilio xuthus, Ostrinia nubilalis, Trichoplusia ni



ABOUT THIS RECORD

ID: MNEST009049
species: Spodoptera frugiperda
miRNA family: miR-4279
source: miRNEST

Taxonomy by NCBI:
Spodoptera frugiperda Spodoptera Amphipyrinae Noctuidae Noctuoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCTCCTCCCGGCTTCAGGGA

miRNA*
 AACCTGGATGGGAGGGGCGGG

mismatches: 3
bulges: 2
View larger
pre-miRNA
 GTTACCCAGGTAAACCTGGATGGGAGGGGCGGGGAGGAATGCGCGGCCGAGGCATTCCGAGAGGACGTGGACGTGGCCGCGGCCGTGGAGCTCCTCCCGG
CTTCAGGGACCGCTCGCC

dot-bracket secondary structure
........(((...(((((.((((((((((.....((....((((((((...((((((....))).)))....)))))))).)).....)))))))))).
..))))).))).......


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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