miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Spodoptera frugiperda, Spodoptera littoralis



ABOUT THIS RECORD

ID: MNEST009049
species: Spodoptera frugiperda
miRNA family: miR-4279
source: miRNEST

Taxonomy by NCBI:
Spodoptera frugiperda Spodoptera Amphipyrinae Noctuidae Noctuoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGCTCCTCCCGGCTTCAGGGA

miRNA*
AACCTGGATGGGAGGGGCGGG

mismatches: 3
bulges: 2

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pre-miRNA
GTTACCCAGGTAAACCTGGATGGGAGGGGCGGGGAGGAATGCGCGGCCGAGGCATTCCGAGAGGACGTGGACGTGGCCGCGGCCGTGGAGCTCCTCCCGG
CTTCAGGGA
CCGCTCGCC


dot-bracket secondary structure
........(((...(((((.((((((((((.....((....((((((((...((((((....))).)))....)))))))).)).....)))))))))).
..))))).)
)).......



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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