ABOUT THIS RECORDspecies: Hevea brasiliensis
miRNA family: MIR166
source: miRNEST
Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCTC miRNA* GGAATGTTGTCTGGTTCAAGG mismatches: 3 bulges: 0 |
pre-miRNA
ATTGCTTGCTAGGAAGCTTTTCTTTTTGAGGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCC
TCGGACCAGGCTTCATTCCTCTCAATTACTGCTTCCATATACATCCATA
dot-bracket secondary structure
...........((((((........((((((((((((..(((((((((.(((.........((((.(((.......)))........)))).......))
).)))))))))..)))))))))))).....)))))).............
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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ATTGCTTGCTAGGAAGCTTTTCTTTTTGAGGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCC
TCGGACCAGGCTTCATTCCTCTCAATTACTGCTTCCATATACATCCATA
dot-bracket secondary structure
...........((((((........((((((((((((..(((((((((.(((.........((((.(((.......)))........)))).......))
).)))))))))..)))))))))))).....)))))).............
SIMILARITIES| miRBase ptc-MIR166i: 0.000000002 PMRD ptc-miR166i: 0.000000002 microPC miR166: 5e-47 | UniProt no hits RFAM mir-166: 0.000009 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
