miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Hevea brasiliensis, Jatropha curcas, Manihot esculenta



ABOUT THIS RECORD

ID: MNEST000913
species: Hevea brasiliensis
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCTC

miRNA*
GGAATGTTGTCTGGTTCAAGG

mismatches: 3
bulges: 0

View larger
pre-miRNA
ATTGCTTGCTAGGAAGCTTTTCTTTTTGAGGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCC
TCGGACCAGGCTTCATTCCTC
TCAATTACTGCTTCCATATACATCCATA


dot-bracket secondary structure
...........((((((........((((((((((((..(((((((((.(((.........((((.(((.......)))........)))).......))
).)))))))))..))))))))
)))).....)))))).............



SIMILARITIES
miRBase ptc-MIR166i: 0.000000002

PMRD ptc-miR166i: 0.000000002

microPC miR166: 5e-47
UniProt no hits

RFAM mir-166: 0.000009
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;