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Species belonging to selected taxon:

Euphorbia esula, Hevea brasiliensis, Jatropha curcas, Linum usitatissimum, Manihot esculenta, Populus deltoides, Populus euphratica, Populus nigra, Populus tremula, Populus tremula x Populus alba, Populus tremula x Populus tremuloides, Populus tremuloides, Populus trichocarpa x Populus nigra, Populus x canadensis, Bruguiera gymnorhiza, Populus trichocarpa, Ricinus communis, Populus trichocarpa x Populus deltoides



ABOUT THIS RECORD

ID: MNEST000913
species: Hevea brasiliensis
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCTC

miRNA*
 GGAATGTTGTCTGGTTCAAGG

mismatches: 3
bulges: 0
View larger
pre-miRNA
 ATTGCTTGCTAGGAAGCTTTTCTTTTTGAGGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCC
TCGGACCAGGCTTCATTCCTCTCAATTACTGCTTCCATATACATCCATA

dot-bracket secondary structure
...........((((((........((((((((((((..(((((((((.(((.........((((.(((.......)))........)))).......))
).)))))))))..)))))))))))).....)))))).............


SIMILARITIES
miRBase ptc-MIR166i: 0.000000002

PMRD ptc-miR166i: 0.000000002

microPC miR166: 5e-47		UniProt no hits

RFAM mir-166: 0.000009		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




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