ABOUT THIS RECORDspecies: Pongo abelii
miRNA family: mir-1273
source: miRNEST
Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGCGACAGAGCAAGACTCGG miRNA* GAGATCATGCCACTGTACTCCAG mismatches: 4 bulges: 2 |
pre-miRNA
TTGCAGTGAGTTGAGATCATGCCACTGTACTCCAGCCTGGGCGACAGAGCAAGACTCGGTCTCAAAAA
dot-bracket secondary structure
......(((((((((.((.(((..((((..((((...))))..)))).))).))))))).))))....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TTGCAGTGAGTTGAGATCATGCCACTGTACTCCAGCCTGGGCGACAGAGCAAGACTCGGTCTCAAAAA
dot-bracket secondary structure
......(((((((((.((.(((..((((..((((...))))..)))).))).))))))).))))....
SIMILARITIES| miRBase ppy-mir-1273: 0.000000000003 PMRD no hits microPC no hits | UniProt no hits RFAM Metazoa_SRP: 2e-20 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
