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Species belonging to selected taxon:

Homo sapiens, Pongo abelii, Pan troglodytes verus



ABOUT THIS RECORD

ID: MNEST009144
species: Pongo abelii
miRNA family: mir-1273
source: miRNEST

Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGGCGACAGAGCAAGACTCGG

miRNA*
GAGATCATGCCACTGTACTCCAG

mismatches: 4
bulges: 2

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pre-miRNA
TTGCAGTGAGTTGAGATCATGCCACTGTACTCCAGCCTGGGCGACAGAGCAAGACTCGGTCTCAAAAA

dot-bracket secondary structure
......(((((((((.((.(((..((((..((((...))))..)))).))).))))))).))))....


SIMILARITIES
miRBase ppy-mir-1273: 0.000000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM Metazoa_SRP: 2e-20
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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