miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Homo sapiens, Pongo abelii, Pan troglodytes verus



ABOUT THIS RECORD

ID: MNEST009153
species: Pongo abelii
miRNA family: mir-1303
source: miRNEST

Taxonomy by NCBI:
Pongo abelii Pongo Ponginae Hominidae Hominoidea Catarrhini Simiiformes Haplorrhini Primates Euarchontoglires Eutheria Theria Mammalia Amniota Tetrapoda Sarcopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGTAGAGACAGGGTTTTGCCA

miRNA*
 GCTAAACCTTTCTTTTTTAAT

mismatches: 2
bulges: 2
View larger
pre-miRNA
 TTGTATTTTTTTGTAGAGACAGGGTTTTGCCACATTGCACAGGCTGGTTTCAAACACCAAATCTGCCTGGTTGGTCTCCCAAAGTGGTGGGATTACAGAC
ATGAGCCACCGCGCCTGGCTAAACCTTTCTTTTTTAATATCAAGT

dot-bracket secondary structure
..........(((.(((((.(((((((.((((....((.(((((.(((((........))))).))))).((((....)))).(((((((..(((.....
.))).))))))))).)))).))))))))))))..)))........


SIMILARITIES
miRBase ppy-mir-619: 0.0000001

PMRD ptc-miRf12412-akr: 0.000000007

microPC no hits		UniProt sp|Q6ZSR6|YP007_HUMAN: 0.0000009

RFAM Metazoa_SRP: 0.0000000001		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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