miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Acropora millepora, Nematostella vectensis, Acropora palmata, Anemonia viridis, Montastraea faveolata, Metridium senile, Porites astreoides, Aiptasia pallida

ABOUT THIS RECORD

ID: MNEST009175
species: Acropora palmata
miRNA family: miR-4275
source: miRNEST

Taxonomy by NCBI:
Acropora palmata Acropora Acroporidae Astrocoeniina Scleractinia Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
ACAATTTCCACTTCTTTTGTC

miRNA*
TGGAAGGAGTGGGGATTAAAA

mismatches: 4
bulges: 0

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pre-miRNA
CGTAAAGTGGATTGGAAGGAGTGGGGATTAAAAAGTAAACCACAATTTCCACTTCTTTTGTCTTGCTCTAT

dot-bracket secondary structure
.(((.(((((..(((((((((((((((((..............)))))))))))))))))..))))).)))

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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