ABOUT THIS RECORDspecies: Acropora palmata
miRNA family: miR-3580
source: miRNEST
Taxonomy by NCBI:
Acropora palmata Acropora Acroporidae Astrocoeniina Scleractinia Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCTTTTACTTATTCTGGTTG miRNA* ACCAGCTGTATGTAGGGTACT mismatches: 2 bulges: 2 |
pre-miRNA
CTTTTGAATGGTGCTTTTACTTATTCTGGTTGCTTAACTATTATAATGATGTAACATCAAGCAATATATTTGTTACTGACCAGCTGTATGTAGGGTACTA
ATTTTTA
dot-bracket secondary structure
.....((.(((((((((.((.(((.(((((((..((((...((((.(((((...))))).....))))...)))).)))))))..))).)))))))))))
.))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CTTTTGAATGGTGCTTTTACTTATTCTGGTTGCTTAACTATTATAATGATGTAACATCAAGCAATATATTTGTTACTGACCAGCTGTATGTAGGGTACTA
ATTTTTA
dot-bracket secondary structure
.....((.(((((((((.((.(((.(((((((..((((...((((.(((((...))))).....))))...)))).)))))))..))).)))))))))))
.))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
