ABOUT THIS RECORDspecies: Acropora palmata
miRNA family: miR-3533
source: miRNEST
Taxonomy by NCBI:
Acropora palmata Acropora Acroporidae Astrocoeniina Scleractinia Hexacorallia Anthozoa Cnidaria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATGAAGTGTGATGTTGACATC miRNA* TGCCAACACTGTGCTTTCTGG mismatches: 4 bulges: 0 |
pre-miRNA
GAAACCACCTACAATTCCATCATGAAGTGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCACCATGTACCC
dot-bracket secondary structure
.........((((...((((((.((((((((.(((((.(((.((........)).))).))))).)))))))).))))))........))))...
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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GAAACCACCTACAATTCCATCATGAAGTGTGATGTTGACATCCGTAAAGATCTGTATGCCAACACTGTGCTTTCTGGTGGTTCCACCATGTACCC
dot-bracket secondary structure
.........((((...((((((.((((((((.(((((.(((.((........)).))).))))).)))))))).))))))........))))...
SIMILARITIES| miRBase gga-mir-3533: 0.00000000000008 PMRD no hits microPC no hits | UniProt sp|P53458|ACT5_DIPDE: 0.00000000003 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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