ABOUT THIS RECORDspecies: Osmerus mordax
miRNA family: mir-103
source: miRNEST
Taxonomy by NCBI:
Osmerus mordax Osmerus Osmerini Osmerinae Osmeridae Osmeroidea Osmeroidei Osmeriformes Protacanthopterygii Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCAGCATTGTACAGGGCTAT miRNA* AGCCTCTTTACAGTGCTGCCTTG mismatches: 2 bulges: 2 |
pre-miRNA
CACATTTGCTCTATGCTTTTAGCCTCTTTACAGTGCTGCCTTGTAGAATCATGTTCAAGCAGCATTGTACAGGGCTATGACAGCATAGAGATCTC
dot-bracket secondary structure
........(((((((((..(((((.((.(((((((((((.(((.((.......)))))))))))))))).)))))))....))))))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CACATTTGCTCTATGCTTTTAGCCTCTTTACAGTGCTGCCTTGTAGAATCATGTTCAAGCAGCATTGTACAGGGCTATGACAGCATAGAGATCTC
dot-bracket secondary structure
........(((((((((..(((((.((.(((((((((((.(((.((.......)))))))))))))))).)))))))....))))))))).....
SIMILARITIES| miRBase fru-mir-103: 2e-30 PMRD no hits microPC no hits | UniProt no hits RFAM mir-103: 1e-25 | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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