ABOUT THIS RECORDspecies: Euprymna scolopes
miRNA family: mir-1322
source: miRNEST
Taxonomy by NCBI:
Euprymna scolopes Euprymna Sepiolidae Sepiolida Decapodiformes Neocoleoidea Coleoidea Cephalopoda Mollusca Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTGCTGCTGCTGATGGTGGC miRNA* CGCGTTCAGATTATTAATAT mismatches: 5 bulges: 1 |
pre-miRNA
AAAGCCGCGTTCAGATTATTAATATCCACGTCGCAGTTGGAGGAGGCCGACTTGGTCACCCGGTTGGGTGGCTCCCCATAGCGAGAATCGCAGAGAGGCG
AATCGGAAAATGTCACCCTCAACTCCTTGTTCTTCGCCGGTGGCGGAGGCGGTGGGGAAGGAGGGAGGTGGTGTTGCTGCTGCTGATGGTGGCTG
dot-bracket secondary structure
..((((((..((((..((.(((((.((((.((((...(((.(((((((.....)))(((((....))))).)))))))..))))((.((((......)))
).)).((.....)).(((((..((((.(((.(((((((...))))))))))..))))...)))))..))))))))).))...))))..)))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAAGCCGCGTTCAGATTATTAATATCCACGTCGCAGTTGGAGGAGGCCGACTTGGTCACCCGGTTGGGTGGCTCCCCATAGCGAGAATCGCAGAGAGGCG
AATCGGAAAATGTCACCCTCAACTCCTTGTTCTTCGCCGGTGGCGGAGGCGGTGGGGAAGGAGGGAGGTGGTGTTGCTGCTGCTGATGGTGGCTG
dot-bracket secondary structure
..((((((..((((..((.(((((.((((.((((...(((.(((((((.....)))(((((....))))).)))))))..))))((.((((......)))
).)).((.....)).(((((..((((.(((.(((((((...))))))))))..))))...)))))..))))))))).))...))))..)))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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