miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Drosophila melanogaster, Drosophila simulans, Drosophila sechellia, Drosophila auraria, Drosophila pseudoobscura, Teleopsis dalmanni, Drosophila willistoni, Drosophila ananassae, Drosophila virilis, Drosophila erecta, Drosophila grimshawi, Ceratitis capitata, Drosophila mojavensis, Drosophila yakuba

ABOUT THIS RECORD

ID: MNEST009323
species: Drosophila pseudoobscura
miRNA family: miR-1962
source: miRNEST

Taxonomy by NCBI:
Drosophila pseudoobscura pseudoobscura subgroup obscura group Sophophora Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
AGAGGCTGGCTCTGGGACAGC

miRNA*
CGTCCTGGCTGCCCTTGAA

mismatches: 4
bulges: 2

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pre-miRNA
CGCACCGTTAGCTTCTCGATGACGTCCTGGCTGCCCTTGAACAGAGGCTGGCTCTGGGACAGCACGGGCAGAATGGTCACAC

dot-bracket secondary structure
...((((((..((.((((.((..((((((((((.((((.....)))).)))))..)))))..)))))).)))))))).....

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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