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Species belonging to selected taxon:
Drosophila melanogaster
,
Aedes aegypti
,
Culex quinquefasciatus
,
Anopheles gambiae
,
Drosophila simulans
,
Glossina morsitans morsitans
,
Phlebotomus papatasi
,
Drosophila sechellia
,
Drosophila auraria
,
Drosophila pseudoobscura
,
Teleopsis dalmanni
,
Lutzomyia longipalpis
,
Drosophila willistoni
,
Drosophila ananassae
,
Drosophila virilis
,
Drosophila erecta
,
Drosophila grimshawi
,
Ceratitis capitata
,
Drosophila mojavensis
,
Cochliomyia hominivorax
,
Anopheles stephensi
,
Haematobia irritans irritans
,
Polypedilum vanderplanki
,
Drosophila yakuba
ABOUT THIS RECORD
ID:
MNEST009323
species:
Drosophila pseudoobscura
miRNA family:
miR-1962
source:
miRNEST
Taxonomy by NCBI:
Drosophila pseudoobscura
pseudoobscura subgroup
obscura group
Sophophora
Drosophila
Drosophiliti
Drosophilina
Drosophilini
Drosophilinae
Drosophilidae
Ephydroidea
Acalyptratae
Schizophora
Cyclorrhapha
Eremoneura
Muscomorpha
Brachycera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGAGGCTGGCTCTGGGACAGC
miRNA*
CGTCCTGGCTGCCCTTGAA
mismatches:
4
bulges:
2
View larger
pre-miRNA
CGCACCGTTAGCTTCTCGATGA
CGTCCTGGCTGCCCTTGAA
C
AGAGGCTGGCTCTGGGACAGC
ACGGGCAGAATGGTCACAC
dot-bracket secondary structure
...((((((..((.((((.((.
.((((((((((.((((...
.
.)))).)))))..)))))..)
))))).)))))))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record