ABOUT THIS RECORDspecies: Lutzomyia longipalpis
miRNA family: mir-87
source: miRNEST
Taxonomy by NCBI:
Lutzomyia longipalpis Lutzomyia Lutzomyia Phlebotominae Psychodidae Psychodoidea Psychodomorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTAGCAAAGTTTCATGCGTT miRNA* TGCATGATGATTTCTTTGACTT mismatches: 2 bulges: 1 |
pre-miRNA
TATTTCAAAAATTGGATATCAAATGCATGATGATTTCTTTGACTTCAACAACACCATTAAAATTATAAAGAAGTTAGCAAAGTTTCATGCGTTGTCTTTT
TTCATGAAAGAAA
dot-bracket secondary structure
...(((((...))))).....(((((((((.(((((..((((((((.......................))))))))..)))))))))))))).((((((
.....))))))..
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TATTTCAAAAATTGGATATCAAATGCATGATGATTTCTTTGACTTCAACAACACCATTAAAATTATAAAGAAGTTAGCAAAGTTTCATGCGTTGTCTTTT
TTCATGAAAGAAA
dot-bracket secondary structure
...(((((...))))).....(((((((((.(((((..((((((((.......................))))))))..)))))))))))))).((((((
.....))))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
